Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916140.1_cds_XP_016465827.1_58744
CDS Infomation

[gene=LOC107788650] [db_xref=GeneID:107788650] [protein=DNA damage-inducible protein 1] [protein_id=XP_016465827.1] [location=join(22826..22891,23035..23067,23566..23699,23853..23961,24476..24592,25276..25341,26148..26210,26297..26341,26431..26492,27389..27482,28125..28217,28317..28386,28529..28599,29149..29200,29439..29464,29596..29724)] [gbkey=CDS]
Sequence

ATGAAGATCACTGTAATGACAACTGACGAACAAATCGTCACTCTCGATGTCGATCGTGAT
GAATCTGTAGAGAACCTGAAAGCTCTACTGGAAGTTGAGACACAAGTGCCTCTTCAGCAG
CAGCAGCTTTTGTACAATGGGAGGGAAATGAGGAATTCTGACAAACTGAGCGCTCTTGGC
GTTGGTGATGGAGATTTGGTGATGATGGTATCTAGTGCAACATCCTTGTCTAGTGCACCT
GCAAATGACTTGAGCTTCAAGCAAGATGGATCTGCTGTAAATCCTTCAGCTTTCCAACAA
CACTTGAGAAATGATTCCAATTTGATGGCCCAGCTTTTTCAGAATGATCCTGAGTTAGCA
CAAGCTGTCCTCGGTAATGACCTAAATAAGCTGCAAGACCTTCTGCGTCTGCGTCATCAG
CACAAATCAGAGCTACGGCGTCGTCAAGAAGAGGAGATGGCACTGCTTTATGCTGATCCA
TTCGATGTCGAGGCACAAAGGAAAATAGAAGAAGCAATTCGCCAGAAAGGAATTGAAGAA
AACTGGGCAGCAGCATTGGAATACAATCCTGAAGCTTTTGCAAGGGTGGTTATGTTATAT
GTTGACATGGAAGTAAATGGTCATCCTCTAAAGGCTTTTGTGGATAGTGGAGCTCAGTCA
ACAATTATATCTAAAAGCTGTGCAGAACGTTGTGGATTGTTGAGGCTATTAGATACACGC
TATAAGGGCATTGCTCATGGAGTTGGTCAATCAGAGATACTAGGTCGTATTCATGTTGCT
CCAATCAAGATTGGGCAAATATTTTACCCTTGTTCTTTCGTGGTACTGGATTCTCCCAAT
ATGGAATTTCTCTTTGGACTTGACATGCTTCGCAAACACCAGTGCATGATTGATCTGAAG
GAGAATGTTCTGAGAGTTGGTGGAGGGGAGGTTGCTGTACCATTTCTACATGAGAAGGAC
ATTCCTGGTCATTTTCTTGATGACGAGAGGTTCGCCAAGGAGGCTTCGAGCTCAGGAACC
CAGGCAACATCTGGAGCAAAGGAGACGACTGGTCCTGCAAAAGGAGGTCCTTCCGGAAGC
GCCCCTGGGAATTCGACACAGGGAACTGAATTTGAAGCCAAAGTTGCAAAGCTTGTTGAA
TTAGGGTTTGGAAGGGATGCAGTAATACAAGCTCTGAAGTTTTTCGATGGCAATGAAGAA
CAAGCCGCCGGATATCTATTTGGGGGTTGA

Peptide Sequence

PEP ID

XP_016465827.1
PEP Infomation

PREDICTED: DNA damage-inducible protein 1 [Nicotiana tabacum]
Sequence

MKITVMTTDEQIVTLDVDRDESVENLKALLEVETQVPLQQQQLLYNGREMRNSDKLSALG
VGDGDLVMMVSSATSLSSAPANDLSFKQDGSAVNPSAFQQHLRNDSNLMAQLFQNDPELA
QAVLGNDLNKLQDLLRLRHQHKSELRRRQEEEMALLYADPFDVEAQRKIEEAIRQKGIEE
NWAAALEYNPEAFARVVMLYVDMEVNGHPLKAFVDSGAQSTIISKSCAERCGLLRLLDTR
YKGIAHGVGQSEILGRIHVAPIKIGQIFYPCSFVVLDSPNMEFLFGLDMLRKHQCMIDLK
ENVLRVGGGEVAVPFLHEKDIPGHFLDDERFAKEASSSGTQATSGAKETTGPAKGGPSGS
APGNSTQGTEFEAKVAKLVELGFGRDAVIQALKFFDGNEEQAAGYLFGG

Transcript Sequence

Gene sequence data has not been registered.